Prometheus Configuration

Complete guide to Prometheus setup, metric collection, scrape configuration, and recording rules.

Do not use this skill when

• The task is unrelated to prometheus configuration
• You need a different domain or tool outside this scope

Instructions

• Clarify goals, constraints, and required inputs.
• Apply relevant best practices and validate outcomes.
• Provide actionable steps and verification.
• If detailed examples are required, open resources/implementation-playbook.md.

Purpose

Configure Prometheus for comprehensive metric collection, alerting, and monitoring of infrastructure and applications.

Use this skill when

• Set up Prometheus monitoring
• Configure metric scraping
• Create recording rules
• Design alert rules
• Implement service discovery

Prometheus Architecture

┌──────────────┐
│ Applications │ ← Instrumented with client libraries
└──────┬───────┘
       │ /metrics endpoint
       ↓
┌──────────────┐
│  Prometheus  │ ← Scrapes metrics periodically
│    Server    │
└──────┬───────┘
       │
       ├─→ AlertManager (alerts)
       ├─→ Grafana (visualization)
       └─→ Long-term storage (Thanos/Cortex)

Installation

Kubernetes with Helm

helm repo add prometheus-community https://prometheus-community.github.io/helm-charts
helm repo update

helm install prometheus prometheus-community/kube-prometheus-stack \
  --namespace monitoring \
  --create-namespace \
  --set prometheus.prometheusSpec.retention=30d \
  --set prometheus.prometheusSpec.storageVolumeSize=50Gi

Docker Compose

version: '3.8'
services:
  prometheus:
    image: prom/prometheus:latest
    ports:
      - "9090:9090"
    volumes:
      - ./prometheus.yml:/etc/prometheus/prometheus.yml
      - prometheus-data:/prometheus
    command:
      - '--config.file=/etc/prometheus/prometheus.yml'
      - '--storage.tsdb.path=/prometheus'
      - '--storage.tsdb.retention.time=30d'

volumes:
  prometheus-data:

Configuration File

prometheus.yml:

global:
  scrape_interval: 15s
  evaluation_interval: 15s
  external_labels:
    cluster: 'production'
    region: 'us-west-2'

# Alertmanager configuration
alerting:
  alertmanagers:
    - static_configs:
        - targets:
          - alertmanager:9093

# Load rules files
rule_files:
  - /etc/prometheus/rules/*.yml

# Scrape configurations
scrape_configs:
  # Prometheus itself
  - job_name: 'prometheus'
    static_configs:
      - targets: ['localhost:9090']

  # Node exporters
  - job_name: 'node-exporter'
    static_configs:
      - targets:
        - 'node1:9100'
        - 'node2:9100'
        - 'node3:9100'
    relabel_configs:
      - source_labels: [__address__]
        target_label: instance
        regex: '([^:]+)(:[0-9]+)?'
        replacement: '${1}'

  # Kubernetes pods with annotations
  - job_name: 'kubernetes-pods'
    kubernetes_sd_configs:
      - role: pod
    relabel_configs:
      - source_labels: [__meta_kubernetes_pod_annotation_prometheus_io_scrape]
        action: keep
        regex: true
      - source_labels: [__meta_kubernetes_pod_annotation_prometheus_io_path]
        action: replace
        target_label: __metrics_path__
        regex: (.+)
      - source_labels: [__address__, __meta_kubernetes_pod_annotation_prometheus_io_port]
        action: replace
        regex: ([^:]+)(?::\d+)?;(\d+)
        replacement: $1:$2
        target_label: __address__
      - source_labels: [__meta_kubernetes_namespace]
        action: replace
        target_label: namespace
      - source_labels: [__meta_kubernetes_pod_name]
        action: replace
        target_label: pod

  # Application metrics
  - job_name: 'my-app'
    static_configs:
      - targets:
        - 'app1.example.com:9090'
        - 'app2.example.com:9090'
    metrics_path: '/metrics'
    scheme: 'https'
    tls_config:
      ca_file: /etc/prometheus/ca.crt
      cert_file: /etc/prometheus/client.crt
      key_file: /etc/prometheus/client.key

Reference: See assets/prometheus.yml.template

Scrape Configurations

Static Targets

scrape_configs:
  - job_name: 'static-targets'
    static_configs:
      - targets: ['host1:9100', 'host2:9100']
        labels:
          env: 'production'
          region: 'us-west-2'

File-based Service Discovery

scrape_configs:
  - job_name: 'file-sd'
    file_sd_configs:
      - files:
        - /etc/prometheus/targets/*.json
        - /etc/prometheus/targets/*.yml
        refresh_interval: 5m

targets/production.json:

[
  {
    "targets": ["app1:9090", "app2:9090"],
    "labels": {
      "env": "production",
      "service": "api"
    }
  }
]

Kubernetes Service Discovery

scrape_configs:
  - job_name: 'kubernetes-services'
    kubernetes_sd_configs:
      - role: service
    relabel_configs:
      - source_labels: [__meta_kubernetes_service_annotation_prometheus_io_scrape]
        action: keep
        regex: true
      - source_labels: [__meta_kubernetes_service_annotation_prometheus_io_scheme]
        action: replace
        target_label: __scheme__
        regex: (https?)
      - source_labels: [__meta_kubernetes_service_annotation_prometheus_io_path]
        action: replace
        target_label: __metrics_path__
        regex: (.+)

Reference: See references/scrape-configs.md

Recording Rules

Create pre-computed metrics for frequently queried expressions:

# /etc/prometheus/rules/recording_rules.yml
groups:
  - name: api_metrics
    interval: 15s
    rules:
      # HTTP request rate per service
      - record: job:http_requests:rate5m
        expr: sum by (job) (rate(http_requests_total[5m]))

      # Error rate percentage
      - record: job:http_requests_errors:rate5m
        expr: sum by (job) (rate(http_requests_total{status=~"5.."}[5m]))

      - record: job:http_requests_error_rate:percentage
        expr: |
          (job:http_requests_errors:rate5m / job:http_requests:rate5m) * 100

      # P95 latency
      - record: job:http_request_duration:p95
        expr: |
          histogram_quantile(0.95,
            sum by (job, le) (rate(http_request_duration_seconds_bucket[5m]))
          )

  - name: resource_metrics
    interval: 30s
    rules:
      # CPU utilization percentage
      - record: instance:node_cpu:utilization
        expr: |
          100 - (avg by (instance) (rate(node_cpu_seconds_total{mode="idle"}[5m])) * 100)

      # Memory utilization percentage
      - record: instance:node_memory:utilization
        expr: |
          100 - ((node_memory_MemAvailable_bytes / node_memory_MemTotal_bytes) * 100)

      # Disk usage percentage
      - record: instance:node_disk:utilization
        expr: |
          100 - ((node_filesystem_avail_bytes / node_filesystem_size_bytes) * 100)

Reference: See references/recording-rules.md

Alert Rules

# /etc/prometheus/rules/alert_rules.yml
groups:
  - name: availability
    interval: 30s
    rules:
      - alert: ServiceDown
        expr: up{job="my-app"} == 0
        for: 1m
        labels:
          severity: critical
        annotations:
          summary: "Service {{ $labels.instance }} is down"
          description: "{{ $labels.job }} has been down for more than 1 minute"

      - alert: HighErrorRate
        expr: job:http_requests_error_rate:percentage > 5
        for: 5m
        labels:
          severity: warning
        annotations:
          summary: "High error rate for {{ $labels.job }}"
          description: "Error rate is {{ $value }}% (threshold: 5%)"

      - alert: HighLatency
        expr: job:http_request_duration:p95 > 1
        for: 5m
        labels:
          severity: warning
        annotations:
          summary: "High latency for {{ $labels.job }}"
          description: "P95 latency is {{ $value }}s (threshold: 1s)"

  - name: resources
    interval: 1m
    rules:
      - alert: HighCPUUsage
        expr: instance:node_cpu:utilization > 80
        for: 5m
        labels:
          severity: warning
        annotations:
          summary: "High CPU usage on {{ $labels.instance }}"
          description: "CPU usage is {{ $value }}%"

      - alert: HighMemoryUsage
        expr: instance:node_memory:utilization > 85
        for: 5m
        labels:
          severity: warning
        annotations:
          summary: "High memory usage on {{ $labels.instance }}"
          description: "Memory usage is {{ $value }}%"

      - alert: DiskSpaceLow
        expr: instance:node_disk:utilization > 90
        for: 5m
        labels:
          severity: critical
        annotations:
          summary: "Low disk space on {{ $labels.instance }}"
          description: "Disk usage is {{ $value }}%"

Validation

# Validate configuration
promtool check config prometheus.yml

# Validate rules
promtool check rules /etc/prometheus/rules/*.yml

# Test query
promtool query instant http://localhost:9090 'up'

Reference: See scripts/validate-prometheus.sh

Best Practices

• Use consistent naming for metrics (prefix_name_unit)
• Set appropriate scrape intervals (15-60s typical)
• Use recording rules for expensive queries
• Implement high availability (multiple Prometheus instances)
• Configure retention based on storage capacity
• Use relabeling for metric cleanup
• Monitor Prometheus itself
• Implement federation for large deployments
• Use Thanos/Cortex for long-term storage
• Document custom metrics

Troubleshooting

Check scrape targets:

curl http://localhost:9090/api/v1/targets

Check configuration:

curl http://localhost:9090/api/v1/status/config

Test query:

curl 'http://localhost:9090/api/v1/query?query=up'

Reference Files

• assets/prometheus.yml.template - Complete configuration template
• references/scrape-configs.md - Scrape configuration patterns
• references/recording-rules.md - Recording rule examples
• scripts/validate-prometheus.sh - Validation script

Related Skills

• grafana-dashboards - For visualization
• slo-implementation - For SLO monitoring
• distributed-tracing - For request tracing